Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.96□□□□□ -0.5
Tlr3Q99MB1 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tlr3Q99MB1 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tlr3Q99MB1 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tlr3Q99MB1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm12899-201ENSMUST00000120565 551 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm10731-201ENSMUST00000181171 448 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm44329-201ENSMUST00000197469 112 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm43520-201ENSMUST00000197996 164 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm5302-201ENSMUST00000202130 796 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Gm10020-201ENSMUST00000081993 612 ntBASIC11.95□□□□□ -0.5
Tlr3Q99MB1 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tlr3Q99MB1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Mir1956-201ENSMUST00000157748 65 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm37444-201ENSMUST00000193605 439 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm42657-201ENSMUST00000201746 211 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tlr3Q99MB1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms