Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm7445-201ENSMUST00000192115 340 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Wbp1-209ENSMUST00000205023 716 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm5526-201ENSMUST00000153604 423 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm8756-201ENSMUST00000183250 929 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm27316-201ENSMUST00000184884 277 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm33080-201ENSMUST00000205429 172 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.78□□□□□ -0.52
Clp1Q99LI9 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.78□□□□□ -0.52
Clp1Q99LI9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.77□□□□□ -0.52
Clp1Q99LI9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.77□□□□□ -0.52
Clp1Q99LI9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clp1Q99LI9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.77□□□□□ -0.53
Clp1Q99LI9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Gm5808-201ENSMUST00000178090 357 ntBASIC11.77□□□□□ -0.53
Clp1Q99LI9 Platr10-202ENSMUST00000191479 818 ntBASIC11.77□□□□□ -0.53
Clp1Q99LI9 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.77□□□□□ -0.53
Clp1Q99LI9 Gm43002-201ENSMUST00000200310 155 ntBASIC11.77□□□□□ -0.53
Clp1Q99LI9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.77□□□□□ -0.53
Clp1Q99LI9 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms