Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.54□□□□□ -0.88
Tram1Q91V04 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.54□□□□□ -0.88
Tram1Q91V04 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tram1Q91V04 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tram1Q91V04 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm11222-201ENSMUST00000119005 738 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Olfml3-204ENSMUST00000169286 874 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Rprl1-202ENSMUST00000198476 238 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm6722-201ENSMUST00000221586 390 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tram1Q91V04 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tram1Q91V04 AA474408-201ENSMUST00000098110 3339 ntBASIC9.53□□□□□ -0.88
Tram1Q91V04 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
Tram1Q91V04 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tram1Q91V04 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Tram1Q91V04 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tram1Q91V04 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Tram1Q91V04 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tram1Q91V04 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.52□□□□□ -0.88
Tram1Q91V04 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.52□□□□□ -0.89
Tram1Q91V04 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tram1Q91V04 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm11941-201ENSMUST00000119904 610 ntBASIC9.52□□□□□ -0.89
Tram1Q91V04 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.52□□□□□ -0.89
Tram1Q91V04 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.52□□□□□ -0.89
Tram1Q91V04 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm27514-201ENSMUST00000183692 110 ntBASIC9.52□□□□□ -0.89
Tram1Q91V04 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.52□□□□□ -0.89
Tram1Q91V04 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms