Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm12986-201ENSMUST00000119037 967 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm13284-201ENSMUST00000121020 547 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm27910-201ENSMUST00000185004 107 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm43520-201ENSMUST00000197996 164 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trub1Q8C0D0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm11246-201ENSMUST00000120880 345 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm17391-201ENSMUST00000171036 126 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Snord55-201ENSMUST00000174939 79 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm25125-201ENSMUST00000083340 136 ntBASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trub1Q8C0D0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms