Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Mir1905-201ENSMUST00000122779 82 ntBASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm15074-201ENSMUST00000117603 936 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm11675-201ENSMUST00000121873 832 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm37293-201ENSMUST00000191658 295 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm36943-201ENSMUST00000194422 282 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm18514-201ENSMUST00000218980 436 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm18968-201ENSMUST00000221319 862 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh19Q80TF3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms