Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm25148-201ENSMUST00000104611 123 ntBASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm15374-201ENSMUST00000119313 844 ntBASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm29067-201ENSMUST00000190821 470 ntBASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm43966-201ENSMUST00000203301 612 ntBASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm5599-201ENSMUST00000209602 788 ntBASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm4604-201ENSMUST00000025040 390 ntBASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm9673-201ENSMUST00000119287 781 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm13022-201ENSMUST00000121181 285 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm6423-201ENSMUST00000204315 934 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gm35713-201ENSMUST00000210516 199 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh8Q7TSK3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms