Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm14579-201ENSMUST00000117068 283 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm8302-201ENSMUST00000119217 852 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm8312-201ENSMUST00000119380 618 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm38018-201ENSMUST00000195651 540 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm6649-201ENSMUST00000199743 1165 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.23□□□□□ -0.13
Clcn1Q64347 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcn1Q64347 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clcn1Q64347 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.22□□□□□ -0.13
Clcn1Q64347 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm17244-201ENSMUST00000192482 3416 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm43522-201ENSMUST00000196697 1922 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm43222-201ENSMUST00000199013 603 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.22□□□□□ -0.13
Clcn1Q64347 CT009713.1-201ENSMUST00000224828 853 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm26226-201ENSMUST00000082509 116 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clcn1Q64347 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clcn1Q64347 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcn1Q64347 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.22□□□□□ -0.13
Clcn1Q64347 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms