Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm3198-201ENSMUST00000208725 1026 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm8170-201ENSMUST00000218581 945 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm8809-201ENSMUST00000119367 743 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm22994-201ENSMUST00000175422 82 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm16410-201ENSMUST00000094550 774 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.27□□□□□ -0.61
Bdp1Q571C7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bdp1Q571C7 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Gm12463-201ENSMUST00000118271 849 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Mir8104-201ENSMUST00000185165 101 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 Gm5259-201ENSMUST00000191231 800 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC11.26□□□□□ -0.61
Bdp1Q571C7 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Gm18119-201ENSMUST00000219972 616 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 A1cf-204ENSMUST00000224564 1432 ntBASIC11.26□□□□□ -0.61
Bdp1Q571C7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bdp1Q571C7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Bdp1Q571C7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms