Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.09□□□□□ -0.95
Trim63Q38HM4 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim63Q38HM4 Gm37893-201ENSMUST00000192826 2437 ntBASIC9.09□□□□□ -0.96
Trim63Q38HM4 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Kdm4a-203ENSMUST00000106403 4536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm25226-201ENSMUST00000158198 123 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm43703-201ENSMUST00000200523 763 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm38245-201ENSMUST00000191702 2621 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.08□□□□□ -0.96
Trim63Q38HM4 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim63Q38HM4 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.07□□□□□ -0.96
Trim63Q38HM4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm10629-201ENSMUST00000137706 2014 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm9164-201ENSMUST00000118700 1014 ntBASIC9.07□□□□□ -0.96
Trim63Q38HM4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm43966-201ENSMUST00000203301 612 ntBASIC9.07□□□□□ -0.96
Trim63Q38HM4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.07□□□□□ -0.96
Trim63Q38HM4 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Zcchc12-201ENSMUST00000048067 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.07□□□□□ -0.96
Trim63Q38HM4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm37052-201ENSMUST00000194929 1831 ntBASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms