Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm13197-201ENSMUST00000117204 225 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm13527-201ENSMUST00000117926 691 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm22876-201ENSMUST00000175450 298 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm29388-201ENSMUST00000190718 284 ntTSL 3 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 9330159N22Rik-201ENSMUST00000221530 1031 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm7609-202ENSMUST00000113407 853 ntTSL 2 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm14138-201ENSMUST00000122061 745 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Myl12a-202ENSMUST00000123686 804 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm2666-201ENSMUST00000160587 891 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Mymk-202ENSMUST00000163967 1210 ntTSL 3 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm5684-201ENSMUST00000198419 961 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 AC153929.1-201ENSMUST00000219009 303 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm5788-201ENSMUST00000220499 435 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm15433-201ENSMUST00000097671 891 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm44198-201ENSMUST00000203063 2636 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm33351-202ENSMUST00000215428 1677 ntTSL 5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm14044-201ENSMUST00000117531 447 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 AC115784.1-201ENSMUST00000227687 1010 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm5624-204ENSMUST00000227882 842 ntAPPRIS P5 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Gm44153-201ENSMUST00000204162 1580 ntBASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ush2AQ2QI47 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Mir1231-201ENSMUST00000175639 81 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC154283.2-201ENSMUST00000228954 614 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm19173-201ENSMUST00000204494 1523 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC154262.2-202ENSMUST00000225158 1331 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm8482-201ENSMUST00000117972 471 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm13841-201ENSMUST00000118829 483 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm11449-201ENSMUST00000119175 476 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms