Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
H3f3aP84244 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm14892-201ENSMUST00000117636 267 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Gm9133-201ENSMUST00000118289 540 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Gm11667-201ENSMUST00000119828 486 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Gm13284-201ENSMUST00000121020 547 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm24074-201ENSMUST00000158178 260 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
H3f3aP84244 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.91□□□□□ -0.82
H3f3aP84244 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm10020-201ENSMUST00000081993 612 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.91□□□□□ -0.82
H3f3aP84244 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.91□□□□□ -0.82
H3f3aP84244 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.91□□□□□ -0.82
H3f3aP84244 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
H3f3aP84244 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H3f3aP84244 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
H3f3aP84244 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
H3f3aP84244 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
H3f3aP84244 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.9□□□□□ -0.82
H3f3aP84244 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
H3f3aP84244 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.9□□□□□ -0.82
H3f3aP84244 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.9□□□□□ -0.82
H3f3aP84244 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.9□□□□□ -0.82
H3f3aP84244 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
H3f3aP84244 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H3f3aP84244 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms