Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Gm42642-201ENSMUST00000200683 355 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Gm7594-201ENSMUST00000218595 871 ntBASIC6.3□□□□□ -1.4
Rps28P62858 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC6.3□□□□□ -1.4
Rps28P62858 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Rps28P62858 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Gm9899-201ENSMUST00000065519 555 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Gm3222-201ENSMUST00000071282 990 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC6.3□□□□□ -1.4
Rps28P62858 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rps28P62858 Acox3-202ENSMUST00000068947 3976 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC6.3□□□□□ -1.4
Rps28P62858 Ckap2l-201ENSMUST00000052708 3137 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rps28P62858 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rps28P62858 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC6.3□□□□□ -1.4
Rps28P62858 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC6.3□□□□□ -1.4
Rps28P62858 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Gm8728-201ENSMUST00000207367 2178 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Gm8486-201ENSMUST00000207508 2171 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Gm8685-201ENSMUST00000207567 2183 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Gm16443-201ENSMUST00000207909 2184 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC6.3□□□□□ -1.4
Rps28P62858 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Rps28P62858 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC6.3□□□□□ -1.4
Rps28P62858 Polr2l-201ENSMUST00000043870 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rps28P62858 Gm35808-201ENSMUST00000204769 2602 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Foxn3-202ENSMUST00000085108 2611 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Vamp3-201ENSMUST00000030797 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Slc26a8-201ENSMUST00000114764 3670 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Ptprr-207ENSMUST00000155606 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Lig3-203ENSMUST00000092849 4560 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm42589-201ENSMUST00000199097 1751 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Rps28P62858 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Clstn3-201ENSMUST00000008297 4014 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC6.29□□□□□ -1.4
Rps28P62858 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC6.29□□□□□ -1.4
Rps28P62858 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC6.29□□□□□ -1.4
Rps28P62858 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.29□□□□□ -1.4
Rps28P62858 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Gm43846-201ENSMUST00000200502 932 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Gm2011-201ENSMUST00000203124 1263 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 AC125350.1-201ENSMUST00000225115 903 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC6.29□□□□□ -1.4
Rps28P62858 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms