Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atxn1P54254 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atxn1P54254 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Atxn1P54254 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Atxn1P54254 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.1□□□□□ -0.63
Atxn1P54254 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Atxn1P54254 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Atxn1P54254 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.1□□□□□ -0.63
Atxn1P54254 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm12247-201ENSMUST00000117585 670 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.1□□□□□ -0.63
Atxn1P54254 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm13827-201ENSMUST00000148801 372 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm17825-201ENSMUST00000206836 794 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm8255-201ENSMUST00000218693 305 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 Gm7525-201ENSMUST00000219425 454 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.1□□□□□ -0.63
Atxn1P54254 Capsl-202ENSMUST00000226688 739 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.1□□□□□ -0.63
Atxn1P54254 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Atxn1P54254 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atxn1P54254 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atxn1P54254 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atxn1P54254 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Atxn1P54254 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Atxn1P54254 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.09□□□□□ -0.63
Atxn1P54254 Gm15815-201ENSMUST00000120569 255 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Mir8093-201ENSMUST00000185043 137 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Gm4903-201ENSMUST00000210462 405 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.09□□□□□ -0.63
Atxn1P54254 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms