Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox1P53783 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox1P53783 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Sox1P53783 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Gm24161-201ENSMUST00000104592 130 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm13215-201ENSMUST00000117559 472 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm14071-201ENSMUST00000117817 509 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox1P53783 Gm23555-201ENSMUST00000157815 135 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm17147-201ENSMUST00000164176 432 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Gm29548-201ENSMUST00000187012 694 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm28105-201ENSMUST00000187788 694 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm29651-201ENSMUST00000189088 697 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox1P53783 Gm3945-201ENSMUST00000196637 683 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Sox1P53783 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox1P53783 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Sox1P53783 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.41□□□□□ -0.58
Sox1P53783 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox1P53783 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox1P53783 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.41□□□□□ -0.58
Sox1P53783 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Sox1P53783 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Sox1P53783 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.4□□□□□ -0.58
Sox1P53783 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.4□□□□□ -0.58
Sox1P53783 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox1P53783 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox1P53783 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox1P53783 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox1P53783 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Gm25735-201ENSMUST00000175164 215 ntBASIC11.4□□□□□ -0.58
Sox1P53783 Gm7880-201ENSMUST00000203748 871 ntBASIC11.4□□□□□ -0.58
Sox1P53783 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sox1P53783 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Gm45878-201ENSMUST00000211839 241 ntBASIC11.4□□□□□ -0.58
Sox1P53783 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.4□□□□□ -0.58
Sox1P53783 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.4□□□□□ -0.58
Sox1P53783 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox1P53783 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox1P53783 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.4□□□□□ -0.58
Sox1P53783 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox1P53783 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox1P53783 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox1P53783 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox1P53783 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox1P53783 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.59
Sox1P53783 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Sox1P53783 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox1P53783 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox1P53783 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox1P53783 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.39□□□□□ -0.59
Sox1P53783 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms