Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 Gm43980-201ENSMUST00000204899 1612 ntBASIC9.83□□□□□ -0.84
GdnfP48540 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
GdnfP48540 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.83□□□□□ -0.84
GdnfP48540 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gm14017-201ENSMUST00000121934 386 ntBASIC9.83□□□□□ -0.84
GdnfP48540 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.83□□□□□ -0.84
GdnfP48540 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gm27341-201ENSMUST00000183570 106 ntBASIC9.83□□□□□ -0.84
GdnfP48540 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC9.83□□□□□ -0.84
GdnfP48540 Gm19287-201ENSMUST00000203190 358 ntBASIC9.83□□□□□ -0.84
GdnfP48540 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gm9797-202ENSMUST00000218003 294 ntBASIC9.83□□□□□ -0.84
GdnfP48540 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.83□□□□□ -0.84
GdnfP48540 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
GdnfP48540 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gm5705-201ENSMUST00000066241 711 ntBASIC9.83□□□□□ -0.84
GdnfP48540 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
GdnfP48540 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
GdnfP48540 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
GdnfP48540 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
GdnfP48540 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
GdnfP48540 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
GdnfP48540 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
GdnfP48540 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
GdnfP48540 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
GdnfP48540 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC9.82□□□□□ -0.84
GdnfP48540 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
GdnfP48540 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
GdnfP48540 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.82□□□□□ -0.84
GdnfP48540 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.82□□□□□ -0.84
GdnfP48540 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
GdnfP48540 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
GdnfP48540 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.82□□□□□ -0.84
GdnfP48540 Gm28071-201ENSMUST00000190355 478 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Gm37533-201ENSMUST00000193848 545 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Gm43244-201ENSMUST00000196994 1285 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.82□□□□□ -0.84
GdnfP48540 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Gm4157-201ENSMUST00000211647 679 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
GdnfP48540 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
GdnfP48540 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms