Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.68□□□□□ -0.7
Prox1P48437 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.68□□□□□ -0.7
Prox1P48437 Gm17812-201ENSMUST00000204935 318 ntBASIC10.68□□□□□ -0.7
Prox1P48437 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.68□□□□□ -0.7
Prox1P48437 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.68□□□□□ -0.7
Prox1P48437 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.68□□□□□ -0.7
Prox1P48437 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Prox1P48437 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Prox1P48437 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Prox1P48437 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Prox1P48437 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm14017-201ENSMUST00000121934 386 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.67□□□□□ -0.7
Prox1P48437 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Gm5616-201ENSMUST00000165252 384 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm8741-201ENSMUST00000174736 384 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Gm29615-201ENSMUST00000185371 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28224-201ENSMUST00000186078 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm29001-201ENSMUST00000186177 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28292-201ENSMUST00000186593 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28101-201ENSMUST00000187608 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm29076-201ENSMUST00000187689 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28302-201ENSMUST00000187931 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28646-201ENSMUST00000188220 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28205-201ENSMUST00000189177 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm29032-201ENSMUST00000189797 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm28695-201ENSMUST00000190300 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm37448-201ENSMUST00000192795 697 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.67□□□□□ -0.7
Prox1P48437 AA914427-201ENSMUST00000193194 1166 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Prox1P48437 AY036118-201ENSMUST00000200021 923 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.67□□□□□ -0.7
Prox1P48437 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm45224-201ENSMUST00000208203 414 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm18212-201ENSMUST00000211678 889 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.67□□□□□ -0.7
Prox1P48437 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Prox1P48437 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Prox1P48437 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms