Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Sox18P43680 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.01□□□□□ -0.65
Sox18P43680 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Gm45177-201ENSMUST00000209104 2307 ntBASIC11.01□□□□□ -0.65
Sox18P43680 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox18P43680 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox18P43680 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.01□□□□□ -0.65
Sox18P43680 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox18P43680 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11□□□□□ -0.65
Sox18P43680 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm25562-201ENSMUST00000104608 133 ntBASIC11□□□□□ -0.65
Sox18P43680 Gm12194-201ENSMUST00000117756 1012 ntBASIC11□□□□□ -0.65
Sox18P43680 Gm14395-201ENSMUST00000120494 563 ntBASIC11□□□□□ -0.65
Sox18P43680 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11□□□□□ -0.65
Sox18P43680 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Gm26272-201ENSMUST00000179241 132 ntBASIC11□□□□□ -0.65
Sox18P43680 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm37724-201ENSMUST00000195240 1221 ntBASIC11□□□□□ -0.65
Sox18P43680 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11□□□□□ -0.65
Sox18P43680 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Gm18123-201ENSMUST00000210874 822 ntBASIC11□□□□□ -0.65
Sox18P43680 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11□□□□□ -0.65
Sox18P43680 AC162934.3-201ENSMUST00000223015 841 ntBASIC11□□□□□ -0.65
Sox18P43680 CT573047.1-201ENSMUST00000223652 851 ntBASIC11□□□□□ -0.65
Sox18P43680 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Sox18P43680 AC154436.1-201ENSMUST00000227272 782 ntBASIC11□□□□□ -0.65
Sox18P43680 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox18P43680 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11□□□□□ -0.65
Sox18P43680 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm43747-201ENSMUST00000201412 1330 ntBASIC11□□□□□ -0.65
Sox18P43680 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11□□□□□ -0.65
Sox18P43680 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox18P43680 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Sox18P43680 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Sox18P43680 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gm5530-201ENSMUST00000117185 985 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm16149-201ENSMUST00000117631 309 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm13286-201ENSMUST00000117750 537 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm13039-201ENSMUST00000118638 794 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox18P43680 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms