Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm23218-201ENSMUST00000158124 276 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Gm19587-201ENSMUST00000191395 545 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Gm43671-201ENSMUST00000200422 433 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.26□□□□□ -0.93
Col8a2P25318 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Col8a2P25318 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Col8a2P25318 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.26□□□□□ -0.93
Col8a2P25318 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.25□□□□□ -0.93
Col8a2P25318 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm14592-201ENSMUST00000117201 560 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Gm11380-201ENSMUST00000118067 560 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC9.25□□□□□ -0.93
Col8a2P25318 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.25□□□□□ -0.93
Col8a2P25318 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.25□□□□□ -0.93
Col8a2P25318 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm9135-201ENSMUST00000182963 990 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm43912-201ENSMUST00000204352 538 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Gm9487-201ENSMUST00000216600 472 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.25□□□□□ -0.93
Col8a2P25318 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Col8a2P25318 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.25□□□□□ -0.93
Col8a2P25318 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.25□□□□□ -0.93
Col8a2P25318 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col8a2P25318 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms