Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Fv4P11370 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Gm12997-201ENSMUST00000120207 640 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Gm22144-201ENSMUST00000157402 102 ntBASIC10.73□□□□□ -0.69
Fv4P11370 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Gm38321-201ENSMUST00000195053 235 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.73□□□□□ -0.69
Fv4P11370 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Fv4P11370 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Gm5451-201ENSMUST00000080545 579 ntBASIC10.73□□□□□ -0.69
Fv4P11370 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Fv4P11370 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.73□□□□□ -0.69
Fv4P11370 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.73□□□□□ -0.69
Fv4P11370 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.72□□□□□ -0.69
Fv4P11370 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Fv4P11370 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Fv4P11370 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Fv4P11370 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Fv4P11370 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.72□□□□□ -0.69
Fv4P11370 Gm25732-201ENSMUST00000175168 60 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Fv4P11370 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Gm28746-201ENSMUST00000187453 380 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.72□□□□□ -0.69
Fv4P11370 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Gm5468-202ENSMUST00000227851 682 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Gm23105-201ENSMUST00000083719 134 ntBASIC10.72□□□□□ -0.69
Fv4P11370 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Fv4P11370 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Fv4P11370 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.72□□□□□ -0.69
Fv4P11370 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Fv4P11370 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Fv4P11370 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Gm23272-201ENSMUST00000104053 129 ntBASIC10.71□□□□□ -0.69
Fv4P11370 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Fv4P11370 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 Gm23699-201ENSMUST00000158835 135 ntBASIC10.71□□□□□ -0.69
Fv4P11370 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Fv4P11370 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Gm4654-201ENSMUST00000183305 982 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Mir7686-201ENSMUST00000200604 57 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Gm44315-201ENSMUST00000203041 219 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Fv4P11370 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms