Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Mir877-201ENSMUST00000104738 85 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm12247-201ENSMUST00000117585 670 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm25226-201ENSMUST00000158198 123 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm18734-201ENSMUST00000172937 808 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm12579-201ENSMUST00000118040 783 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm23958-201ENSMUST00000157207 105 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm7003-201ENSMUST00000195089 312 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm42660-201ENSMUST00000197733 947 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm2965-201ENSMUST00000198365 343 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm44262-201ENSMUST00000204969 372 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Saa-ps-201ENSMUST00000211148 320 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm13812-201ENSMUST00000118061 1347 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm13810-201ENSMUST00000118584 1347 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gm45165-201ENSMUST00000207763 1631 ntBASIC10□□□□□ -0.81
Pcdh1F7BJK1 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms