Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm9555-201ENSMUST00000200908 583 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4bQ9D8B3 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm13422-201ENSMUST00000118834 504 ntBASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm13408-201ENSMUST00000119822 798 ntBASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm13935-201ENSMUST00000121859 798 ntBASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp4bQ9D8B3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm15573-201ENSMUST00000119487 540 ntBASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm14585-201ENSMUST00000120713 634 ntBASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm26461-201ENSMUST00000175064 290 ntBASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Mir8115-201ENSMUST00000184992 119 ntBASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm37301-201ENSMUST00000195412 568 ntBASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp4bQ9D8B3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms