Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.61□□□□□ -0.07
U2af1Q9D883 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm16165-201ENSMUST00000160140 795 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.61□□□□□ -0.07
U2af1Q9D883 Mir6958-201ENSMUST00000184207 73 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm28833-201ENSMUST00000189671 559 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm45120-201ENSMUST00000208880 408 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.61□□□□□ -0.07
U2af1Q9D883 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm2128-201ENSMUST00000108009 2560 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Gm43482-201ENSMUST00000202797 1861 ntBASIC14.61□□□□□ -0.07
U2af1Q9D883 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
U2af1Q9D883 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
U2af1Q9D883 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm16397-201ENSMUST00000122201 494 ntBASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm18059-201ENSMUST00000208073 580 ntBASIC14.6□□□□□ -0.07
U2af1Q9D883 Saa-ps-201ENSMUST00000211148 320 ntBASIC14.6□□□□□ -0.07
U2af1Q9D883 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 AC159196.1-201ENSMUST00000225524 377 ntBASIC14.6□□□□□ -0.07
U2af1Q9D883 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.6□□□□□ -0.07
U2af1Q9D883 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
U2af1Q9D883 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Gm45206-201ENSMUST00000206885 2285 ntBASIC14.6□□□□□ -0.07
U2af1Q9D883 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
U2af1Q9D883 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC14.59□□□□□ -0.07
U2af1Q9D883 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Gm19927-201ENSMUST00000185792 781 ntBASIC14.59□□□□□ -0.07
U2af1Q9D883 Gm43667-201ENSMUST00000198616 1095 ntBASIC14.59□□□□□ -0.07
U2af1Q9D883 CT025618.1-203ENSMUST00000227008 589 ntBASIC14.59□□□□□ -0.07
U2af1Q9D883 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
U2af1Q9D883 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
U2af1Q9D883 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
U2af1Q9D883 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
U2af1Q9D883 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
U2af1Q9D883 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms