Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm8601-201ENSMUST00000182096 909 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm6644-201ENSMUST00000186507 951 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm35960-201ENSMUST00000202712 767 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm17872-201ENSMUST00000222550 532 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Btrc-209ENSMUST00000224478 2194 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm12028-201ENSMUST00000118065 436 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm7765-201ENSMUST00000182585 974 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm38188-201ENSMUST00000192879 856 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.8□□□□□ -0.52
Clp1Q99LI9 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clp1Q99LI9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.79□□□□□ -0.52
Clp1Q99LI9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clp1Q99LI9 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms