Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Usp11Q99K46 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gm15352-201ENSMUST00000118696 270 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gm9211-201ENSMUST00000182882 975 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.74□□□□□ -0.53
Usp11Q99K46 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Usp11Q99K46 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.74□□□□□ -0.53
Usp11Q99K46 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm7150-201ENSMUST00000122032 981 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm37986-201ENSMUST00000193285 383 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm42997-202ENSMUST00000200321 985 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.73□□□□□ -0.53
Usp11Q99K46 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Usp11Q99K46 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp11Q99K46 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp11Q99K46 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Usp11Q99K46 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms