Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm12254-201ENSMUST00000134617 471 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm9574-201ENSMUST00000173127 845 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm8525-201ENSMUST00000189674 861 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm17541-201ENSMUST00000080062 525 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx54Q8K4L0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm26379-201ENSMUST00000178125 138 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm5194-201ENSMUST00000221457 742 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 AC107711.3-201ENSMUST00000228939 1035 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm7061-201ENSMUST00000118127 1416 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.55□□□□□ -0.08
Ddx54Q8K4L0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gm23129-201ENSMUST00000104259 132 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gm14633-201ENSMUST00000121152 470 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Mir6396-201ENSMUST00000183603 111 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Mir6934-201ENSMUST00000183965 62 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gm7539-201ENSMUST00000189789 630 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gm18391-201ENSMUST00000217189 658 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms