Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Gm42427-201ENSMUST00000200473 5292 ntBASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cchcr1Q8K2I2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gm11836-201ENSMUST00000121022 441 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Mir1896-201ENSMUST00000122641 81 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Mir7051-201ENSMUST00000184167 73 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Igkv2-116-201ENSMUST00000199327 362 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Gm5451-201ENSMUST00000080545 579 ntBASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cchcr1Q8K2I2 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cchcr1Q8K2I2 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.15□□□□□ -0.31
Cchcr1Q8K2I2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm14592-201ENSMUST00000117201 560 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm14395-201ENSMUST00000120494 563 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm23699-201ENSMUST00000158835 135 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm28032-201ENSMUST00000184104 96 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm27441-201ENSMUST00000185000 105 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Mir6420-201ENSMUST00000185032 102 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.14□□□□□ -0.31
Cchcr1Q8K2I2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms