Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc49a3Q8CE47 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc49a3Q8CE47 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Slc49a3Q8CE47 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Slc49a3Q8CE47 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm37489-201ENSMUST00000191883 159 ntBASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc49a3Q8CE47 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm25148-201ENSMUST00000104611 123 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm15207-201ENSMUST00000119259 442 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm25226-201ENSMUST00000158198 123 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm27441-201ENSMUST00000185000 105 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm28746-201ENSMUST00000187453 380 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm8885-201ENSMUST00000189382 598 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm44364-201ENSMUST00000198368 141 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm5302-201ENSMUST00000202130 796 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc49a3Q8CE47 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms