Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm15528-201ENSMUST00000117821 864 ntBASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Gm19246-201ENSMUST00000173599 255 ntBASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Ginm1-202ENSMUST00000065124 300 ntBASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc38Q8CDN8 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm25492-201ENSMUST00000157383 129 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm24074-201ENSMUST00000158178 260 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm23694-201ENSMUST00000179335 110 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Mir6927-201ENSMUST00000184494 71 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm43186-201ENSMUST00000198130 824 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm43852-201ENSMUST00000202098 917 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc38Q8CDN8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms