Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm12274-201ENSMUST00000120062 385 ntBASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm40414-201ENSMUST00000197608 481 ntBASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.98□□□□□ -0.33
Usp44Q8C2S0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp44Q8C2S0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.97□□□□□ -0.33
Usp44Q8C2S0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.97□□□□□ -0.33
Usp44Q8C2S0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp44Q8C2S0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms