Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm25880-201ENSMUST00000104331 132 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm13351-201ENSMUST00000118087 414 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm9673-201ENSMUST00000119287 781 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm4917-201ENSMUST00000121452 650 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm9081-201ENSMUST00000182346 991 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm4753-201ENSMUST00000188327 1255 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm19166-201ENSMUST00000196041 1063 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm44755-201ENSMUST00000207830 2102 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm5308-201ENSMUST00000196752 1354 ntBASIC11□□□□□ -0.65
Pcdh19Q80TF3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh19Q80TF3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm25053-201ENSMUST00000103982 133 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm25922-201ENSMUST00000104281 130 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm15626-201ENSMUST00000117478 868 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm13284-201ENSMUST00000121020 547 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm24679-201ENSMUST00000158762 111 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm18776-201ENSMUST00000188833 654 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm25053-202ENSMUST00000199731 132 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm6423-201ENSMUST00000204315 934 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gm7082-201ENSMUST00000209880 969 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh19Q80TF3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh19Q80TF3 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms