Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Mir8111-201ENSMUST00000184463 137 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm37851-201ENSMUST00000193871 889 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm42689-201ENSMUST00000202403 404 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm5278-201ENSMUST00000055957 552 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Erich3-203ENSMUST00000189969 3460 ntBASIC12.67□□□□□ -0.38
Ddx55Q6ZPL9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm14592-201ENSMUST00000117201 560 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm11919-201ENSMUST00000117609 721 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm5764-201ENSMUST00000118817 885 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm37688-201ENSMUST00000195195 465 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms