Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm28391-201ENSMUST00000185202 379 ntBASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Gm29528-201ENSMUST00000186699 379 ntBASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Gm29526-201ENSMUST00000187217 379 ntBASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Gm4430-202ENSMUST00000193902 1041 ntBASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 AC124613.1-201ENSMUST00000198711 88 ntBASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd4Q6PDQ2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm6630-201ENSMUST00000119199 454 ntBASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm24943-201ENSMUST00000158329 433 ntBASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm29157-201ENSMUST00000188753 612 ntBASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 AC117769.1-201ENSMUST00000224716 1120 ntBASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chd4Q6PDQ2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Gm11736-201ENSMUST00000121468 505 ntBASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Gm7985-201ENSMUST00000183329 981 ntBASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Gm8022-201ENSMUST00000191763 904 ntBASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Gm42710-201ENSMUST00000200608 985 ntBASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chd4Q6PDQ2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm6755-201ENSMUST00000100598 864 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm6740-201ENSMUST00000100617 864 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm12028-201ENSMUST00000118065 436 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm14997-201ENSMUST00000119232 636 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm26208-201ENSMUST00000158677 124 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Ighv1-70-201ENSMUST00000196509 351 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm5738-201ENSMUST00000206016 779 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 AC116797.2-202ENSMUST00000223587 1017 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Chd4Q6PDQ2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm14006-201ENSMUST00000122132 981 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms