Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Mir6953-201ENSMUST00000184745 68 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm42751-201ENSMUST00000198065 559 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm18010-201ENSMUST00000203553 202 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm5178-201ENSMUST00000219380 898 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 AC164099.1-201ENSMUST00000227780 333 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm6478-201ENSMUST00000099450 742 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx49Q4FZF3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm15625-201ENSMUST00000117617 1093 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm3828-201ENSMUST00000121817 257 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm20781-201ENSMUST00000193154 693 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm21736-201ENSMUST00000195399 693 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Gm6331-201ENSMUST00000217890 450 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx49Q4FZF3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms