Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm18862-201ENSMUST00000204643 933 ntBASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 AC241616.1-201ENSMUST00000213741 166 ntBASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Arhgef40Q3UPH7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Gm13426-201ENSMUST00000117887 795 ntBASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Gm42588-201ENSMUST00000200538 1297 ntBASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 AC102523.1-201ENSMUST00000228706 1144 ntBASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Gm19178-201ENSMUST00000217524 1819 ntBASIC16.12■□□□□ 0.17
Arhgef40Q3UPH7 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm15626-201ENSMUST00000117478 868 ntBASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm6425-201ENSMUST00000136332 790 ntBASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm44236-201ENSMUST00000204492 513 ntBASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Gm13104-201ENSMUST00000119651 1446 ntBASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Arhgef40Q3UPH7 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Kif4-ps-202ENSMUST00000185083 652 ntBASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm42803-201ENSMUST00000201051 451 ntBASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm45893-201ENSMUST00000211899 247 ntBASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm38111-201ENSMUST00000194817 2741 ntBASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm45719-201ENSMUST00000207954 1662 ntBASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Arhgef40Q3UPH7 Gm45165-201ENSMUST00000207763 1631 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms