Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm10254-201ENSMUST00000052888 867 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.01□□□□□ -0.81
SgcbP82349 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SgcbP82349 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SgcbP82349 Gm14395-201ENSMUST00000120494 563 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Gm12752-201ENSMUST00000121657 811 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.01□□□□□ -0.81
SgcbP82349 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.01□□□□□ -0.81
SgcbP82349 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.01□□□□□ -0.81
SgcbP82349 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Ighv10-4-201ENSMUST00000193702 299 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Gm37458-201ENSMUST00000194055 410 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC10.01□□□□□ -0.81
SgcbP82349 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SgcbP82349 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.01□□□□□ -0.81
SgcbP82349 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SgcbP82349 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SgcbP82349 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SgcbP82349 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
SgcbP82349 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10□□□□□ -0.81
SgcbP82349 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Gm25766-201ENSMUST00000104101 131 ntBASIC10□□□□□ -0.81
SgcbP82349 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Gm12467-201ENSMUST00000117625 745 ntBASIC10□□□□□ -0.81
SgcbP82349 Gm11652-201ENSMUST00000117842 1267 ntBASIC10□□□□□ -0.81
SgcbP82349 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10□□□□□ -0.81
SgcbP82349 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10□□□□□ -0.81
SgcbP82349 Gm28439-201ENSMUST00000187714 876 ntBASIC10□□□□□ -0.81
SgcbP82349 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Gm37973-201ENSMUST00000195767 1289 ntBASIC10□□□□□ -0.81
SgcbP82349 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
SgcbP82349 Gm8365-201ENSMUST00000197334 648 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms