Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm9555-201ENSMUST00000200908 583 ntBASIC9.8□□□□□ -0.84
Lsm6P62313 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm6P62313 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.8□□□□□ -0.84
Lsm6P62313 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.8□□□□□ -0.84
Lsm6P62313 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Lsm6P62313 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.8□□□□□ -0.84
Lsm6P62313 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm6P62313 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm6P62313 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.8□□□□□ -0.84
Lsm6P62313 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm6P62313 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm11949-201ENSMUST00000117640 372 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Gm12566-201ENSMUST00000121479 359 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm6P62313 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm10020-201ENSMUST00000081993 612 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.79□□□□□ -0.84
Lsm6P62313 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Lsm6P62313 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm6P62313 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.79□□□□□ -0.84
Lsm6P62313 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm6P62313 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lsm6P62313 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms