Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tpm1P58771 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tpm1P58771 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tpm1P58771 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tpm1P58771 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tpm1P58771 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Tpm1P58771 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Gm11509-201ENSMUST00000117358 325 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.39□□□□□ -0.43
Tpm1P58771 Gm15276-201ENSMUST00000145953 498 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Gm5616-201ENSMUST00000165252 384 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 Gm8741-201ENSMUST00000174736 384 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 AY036118-201ENSMUST00000200021 923 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Tpm1P58771 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.39□□□□□ -0.43
Tpm1P58771 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.39□□□□□ -0.43
Tpm1P58771 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Gm43274-201ENSMUST00000202545 5000 ntBASIC12.39□□□□□ -0.43
Tpm1P58771 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tpm1P58771 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tpm1P58771 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.38□□□□□ -0.43
Tpm1P58771 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm20796-201ENSMUST00000180355 5838 ntBASIC12.38□□□□□ -0.43
Tpm1P58771 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tpm1P58771 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tpm1P58771 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm11663-201ENSMUST00000117888 290 ntBASIC12.38□□□□□ -0.43
Tpm1P58771 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm17812-201ENSMUST00000204935 318 ntBASIC12.38□□□□□ -0.43
Tpm1P58771 Gm6334-201ENSMUST00000207083 228 ntBASIC12.38□□□□□ -0.43
Tpm1P58771 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Tpm1P58771 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.38□□□□□ -0.43
Tpm1P58771 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tpm1P58771 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tpm1P58771 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.38□□□□□ -0.43
Tpm1P58771 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tpm1P58771 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tpm1P58771 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tpm1P58771 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Tpm1P58771 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.37□□□□□ -0.43
Tpm1P58771 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms