Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm14058-201ENSMUST00000116082 735 ntBASIC10.07□□□□□ -0.8
Rfx3P48381 Gm13035-201ENSMUST00000117496 342 ntBASIC10.07□□□□□ -0.8
Rfx3P48381 Gm12579-201ENSMUST00000118040 783 ntBASIC10.07□□□□□ -0.8
Rfx3P48381 Gm15566-201ENSMUST00000121130 590 ntBASIC10.07□□□□□ -0.8
Rfx3P48381 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.07□□□□□ -0.8
Rfx3P48381 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.07□□□□□ -0.8
Rfx3P48381 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Rfx3P48381 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.07□□□□□ -0.8
Rfx3P48381 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.07□□□□□ -0.8
Rfx3P48381 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rfx3P48381 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Rfx3P48381 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Rfx3P48381 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.06□□□□□ -0.8
Rfx3P48381 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.06□□□□□ -0.8
Rfx3P48381 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.06□□□□□ -0.8
Rfx3P48381 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.06□□□□□ -0.8
Rfx3P48381 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.06□□□□□ -0.8
Rfx3P48381 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Rfx3P48381 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Gm37597-201ENSMUST00000191853 382 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Gm37986-201ENSMUST00000193285 383 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.06□□□□□ -0.8
Rfx3P48381 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.06□□□□□ -0.8
Rfx3P48381 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.06□□□□□ -0.8
Rfx3P48381 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Rfx3P48381 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.06□□□□□ -0.8
Rfx3P48381 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Rfx3P48381 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.06□□□□□ -0.8
Rfx3P48381 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms