Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.14□□□□□ -0.95
VhlP40338 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.14□□□□□ -0.95
VhlP40338 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.14□□□□□ -0.95
VhlP40338 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.14□□□□□ -0.95
VhlP40338 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.14□□□□□ -0.95
VhlP40338 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.14□□□□□ -0.95
VhlP40338 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.14□□□□□ -0.95
VhlP40338 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VhlP40338 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
VhlP40338 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VhlP40338 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VhlP40338 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
VhlP40338 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.13□□□□□ -0.95
VhlP40338 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.13□□□□□ -0.95
VhlP40338 Gm8459-201ENSMUST00000162504 760 ntBASIC9.13□□□□□ -0.95
VhlP40338 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gm3332-201ENSMUST00000189337 928 ntBASIC9.13□□□□□ -0.95
VhlP40338 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.13□□□□□ -0.95
VhlP40338 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.13□□□□□ -0.95
VhlP40338 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.13□□□□□ -0.95
VhlP40338 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.13□□□□□ -0.95
VhlP40338 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.13□□□□□ -0.95
VhlP40338 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VhlP40338 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.13□□□□□ -0.95
VhlP40338 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VhlP40338 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VhlP40338 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 326.7 ms