Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.19□□□□□ -0.78
Nedd8P29595 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.19□□□□□ -0.78
Nedd8P29595 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.19□□□□□ -0.78
Nedd8P29595 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.19□□□□□ -0.78
Nedd8P29595 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nedd8P29595 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 AC165148.1-201ENSMUST00000224795 2372 ntBASIC10.19□□□□□ -0.78
Nedd8P29595 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nedd8P29595 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC10.19□□□□□ -0.78
Nedd8P29595 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nedd8P29595 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.18□□□□□ -0.78
Nedd8P29595 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm27441-201ENSMUST00000185000 105 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Gm29649-201ENSMUST00000185649 419 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm2553-201ENSMUST00000215986 605 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.18□□□□□ -0.78
Nedd8P29595 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm43633-201ENSMUST00000202455 2330 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.18□□□□□ -0.78
Nedd8P29595 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.18□□□□□ -0.78
Nedd8P29595 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Nedd8P29595 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nedd8P29595 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nedd8P29595 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Btrc-206ENSMUST00000224102 3037 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nedd8P29595 Gm11511-201ENSMUST00000118146 540 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Gm11660-201ENSMUST00000120955 412 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms