Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.22□□□□□ -0.61
VimP20152 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.22□□□□□ -0.61
VimP20152 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.22□□□□□ -0.61
VimP20152 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.22□□□□□ -0.61
VimP20152 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.22□□□□□ -0.61
VimP20152 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.22□□□□□ -0.61
VimP20152 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.22□□□□□ -0.61
VimP20152 Mir6977-201ENSMUST00000184960 64 ntBASIC11.22□□□□□ -0.61
VimP20152 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.22□□□□□ -0.61
VimP20152 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.22□□□□□ -0.61
VimP20152 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.22□□□□□ -0.61
VimP20152 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.22□□□□□ -0.61
VimP20152 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.22□□□□□ -0.61
VimP20152 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.22□□□□□ -0.61
VimP20152 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.22□□□□□ -0.61
VimP20152 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.22□□□□□ -0.61
VimP20152 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
VimP20152 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VimP20152 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC11.22□□□□□ -0.61
VimP20152 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
VimP20152 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VimP20152 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
VimP20152 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.21□□□□□ -0.61
VimP20152 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC11.21□□□□□ -0.61
VimP20152 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.21□□□□□ -0.61
VimP20152 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.21□□□□□ -0.61
VimP20152 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.21□□□□□ -0.61
VimP20152 Gm9002-201ENSMUST00000178437 499 ntBASIC11.21□□□□□ -0.61
VimP20152 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.21□□□□□ -0.61
VimP20152 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VimP20152 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
VimP20152 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC11.21□□□□□ -0.62
VimP20152 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
VimP20152 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
VimP20152 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
VimP20152 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC11.21□□□□□ -0.62
VimP20152 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
VimP20152 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
VimP20152 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.21□□□□□ -0.62
VimP20152 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VimP20152 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC11.2□□□□□ -0.62
VimP20152 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
VimP20152 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.2□□□□□ -0.62
VimP20152 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.2□□□□□ -0.62
VimP20152 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 AC121574.1-201ENSMUST00000228770 3132 ntBASIC11.2□□□□□ -0.62
VimP20152 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.2□□□□□ -0.62
VimP20152 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.2□□□□□ -0.62
VimP20152 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC11.2□□□□□ -0.62
VimP20152 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Gm14644-201ENSMUST00000116671 647 ntBASIC11.2□□□□□ -0.62
VimP20152 Gm14928-201ENSMUST00000120198 477 ntBASIC11.2□□□□□ -0.62
VimP20152 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.2□□□□□ -0.62
VimP20152 Gm20495-201ENSMUST00000173902 235 ntBASIC11.2□□□□□ -0.62
VimP20152 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms