Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Cdx1P18111 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cdx1P18111 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm12015-201ENSMUST00000117065 843 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm14208-201ENSMUST00000119645 678 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 Gm14999-201ENSMUST00000121039 624 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm32999-201ENSMUST00000192693 562 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 Gm45433-201ENSMUST00000209386 247 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.04□□□□□ -0.96
Cdx1P18111 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Cdx1P18111 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.04□□□□□ -0.96
Cdx1P18111 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.04□□□□□ -0.96
Cdx1P18111 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cdx1P18111 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Gm24231-201ENSMUST00000104315 133 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm12266-201ENSMUST00000120311 962 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm25732-201ENSMUST00000175168 60 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm8913-201ENSMUST00000209491 641 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.03□□□□□ -0.96
Cdx1P18111 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.03□□□□□ -0.96
Cdx1P18111 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdx1P18111 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cdx1P18111 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms