Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
P04224 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.76□□□□□ -0.85
P04224 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.76□□□□□ -0.85
P04224 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.76□□□□□ -0.85
P04224 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.76□□□□□ -0.85
P04224 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.76□□□□□ -0.85
P04224 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.76□□□□□ -0.85
P04224 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.76□□□□□ -0.85
P04224 Olfr284-202ENSMUST00000206647 966 ntBASIC9.76□□□□□ -0.85
P04224 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.76□□□□□ -0.85
P04224 Gm19309-201ENSMUST00000218295 205 ntBASIC9.76□□□□□ -0.85
P04224 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.76□□□□□ -0.85
P04224 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P04224 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
P04224 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P04224 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.76□□□□□ -0.85
P04224 Nln-205ENSMUST00000224945 2486 ntBASIC9.76□□□□□ -0.85
P04224 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
P04224 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC9.76□□□□□ -0.85
P04224 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.76□□□□□ -0.85
P04224 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.75□□□□□ -0.85
P04224 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.75□□□□□ -0.85
P04224 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.75□□□□□ -0.85
P04224 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.75□□□□□ -0.85
P04224 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.75□□□□□ -0.85
P04224 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
P04224 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
P04224 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.75□□□□□ -0.85
P04224 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
P04224 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Gm12015-201ENSMUST00000117065 843 ntBASIC9.75□□□□□ -0.85
P04224 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.75□□□□□ -0.85
P04224 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.75□□□□□ -0.85
P04224 Gm5070-201ENSMUST00000177599 862 ntBASIC9.75□□□□□ -0.85
P04224 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.75□□□□□ -0.85
P04224 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Gm37424-201ENSMUST00000191727 561 ntBASIC9.75□□□□□ -0.85
P04224 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.75□□□□□ -0.85
P04224 Gm4607-201ENSMUST00000206649 577 ntBASIC9.75□□□□□ -0.85
P04224 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.75□□□□□ -0.85
P04224 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.75□□□□□ -0.85
P04224 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.75□□□□□ -0.85
P04224 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
P04224 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.75□□□□□ -0.85
P04224 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.75□□□□□ -0.85
P04224 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P04224 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P04224 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
P04224 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.74□□□□□ -0.85
P04224 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms