Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf13O54965 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Rnf13O54965 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf13O54965 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.08□□□□□ -0.8
Rnf13O54965 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rnf13O54965 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf13O54965 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf13O54965 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf13O54965 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Rnf13O54965 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.07□□□□□ -0.8
Rnf13O54965 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Rnf13O54965 Snord17-201ENSMUST00000104526 238 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm16505-201ENSMUST00000179981 232 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.07□□□□□ -0.8
Rnf13O54965 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Gm6108-201ENSMUST00000208365 367 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.07□□□□□ -0.8
Rnf13O54965 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.07□□□□□ -0.8
Rnf13O54965 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf13O54965 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.06□□□□□ -0.8
Rnf13O54965 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rnf13O54965 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.06□□□□□ -0.8
Rnf13O54965 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rnf13O54965 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rnf13O54965 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Rnf13O54965 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf13O54965 Gm15198-201ENSMUST00000117283 177 ntBASIC10.06□□□□□ -0.8
Rnf13O54965 Gm12247-201ENSMUST00000117585 670 ntBASIC10.06□□□□□ -0.8
Rnf13O54965 Gm14724-201ENSMUST00000118400 537 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms