Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Gm8170-201ENSMUST00000218581 945 ntBASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
B020004C17RikJ3QP07 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm5510-201ENSMUST00000117826 486 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm15258-201ENSMUST00000153801 741 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm28032-201ENSMUST00000184104 96 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm38038-201ENSMUST00000193803 259 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm6677-201ENSMUST00000195100 441 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm43097-201ENSMUST00000196867 151 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm5278-201ENSMUST00000055957 552 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
B020004C17RikJ3QP07 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Gm29543-201ENSMUST00000188138 967 ntBASIC12.43□□□□□ -0.42
B020004C17RikJ3QP07 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms