Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a2Q9JLR1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm9211-201ENSMUST00000182882 975 ntBASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm8342-201ENSMUST00000209839 757 ntBASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a2Q9JLR1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm22144-201ENSMUST00000157402 102 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm22902-201ENSMUST00000158488 302 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm18367-201ENSMUST00000176139 600 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm12407-201ENSMUST00000180219 324 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm9540-201ENSMUST00000188230 478 ntBASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms