Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm25214-201ENSMUST00000104573 129 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Mir1247-201ENSMUST00000116706 82 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm5455-201ENSMUST00000058710 715 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.42□□□□□ -0.9
Smim3Q99PE5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim3Q99PE5 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.41□□□□□ -0.9
Smim3Q99PE5 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.41□□□□□ -0.9
Smim3Q99PE5 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm20495-201ENSMUST00000173902 235 ntBASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm10312-201ENSMUST00000078515 489 ntBASIC9.41□□□□□ -0.9
Smim3Q99PE5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim3Q99PE5 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms