Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm11500-201ENSMUST00000118237 601 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm22144-201ENSMUST00000157402 102 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm44506-201ENSMUST00000206278 965 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Lect2-202ENSMUST00000225183 823 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Gm4978-201ENSMUST00000071565 801 ntBASIC11.76□□□□□ -0.53
Usp11Q99K46 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp11Q99K46 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp11Q99K46 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.75□□□□□ -0.53
Usp11Q99K46 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.75□□□□□ -0.53
Usp11Q99K46 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.75□□□□□ -0.53
Usp11Q99K46 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.75□□□□□ -0.53
Usp11Q99K46 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.75□□□□□ -0.53
Usp11Q99K46 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.75□□□□□ -0.53
Usp11Q99K46 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.75□□□□□ -0.53
Usp11Q99K46 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.75□□□□□ -0.53
Usp11Q99K46 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Usp11Q99K46 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Usp11Q99K46 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Usp11Q99K46 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Usp11Q99K46 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Usp11Q99K46 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms