Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb18Q91Y02 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb18Q91Y02 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdhb18Q91Y02 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb18Q91Y02 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb18Q91Y02 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm11619-201ENSMUST00000117474 237 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm12218-201ENSMUST00000117666 399 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm14497-201ENSMUST00000119537 580 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm14234-201ENSMUST00000119539 845 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm5700-201ENSMUST00000191483 989 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm9369-201ENSMUST00000196009 733 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb18Q91Y02 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm12663-201ENSMUST00000118481 958 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm11578-201ENSMUST00000118530 459 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm17070-201ENSMUST00000170463 784 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm30946-201ENSMUST00000198288 724 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb18Q91Y02 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb18Q91Y02 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms