Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm13916-201ENSMUST00000117368 628 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm14277-201ENSMUST00000121195 360 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm16505-201ENSMUST00000179981 232 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afjQ8R1M2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm13263-201ENSMUST00000121271 838 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm10807-201ENSMUST00000177134 795 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afjQ8R1M2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H2afjQ8R1M2 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms